R繪圖基礎指南 | 3. 散點圖(一)

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3. 散點圖

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散點圖通常用于刻畫兩個連續型變量之間的關系。繪制散點圖時,數據集中的每一個觀測值都由每個點表示。

3.1 繪制基本散點圖

library(gcookbook) 
library(ggplot2)
# 列出我們用到的列
head(heightweight[, c("ageYear", "heightIn")])
> head(heightweight[, c("ageYear", "heightIn")])
  ageYear heightIn
1   11.92     56.3
2   12.92     62.3
3   12.75     63.3
4   13.42     59.0
5   15.92     62.5
6   14.25     62.5
ggplot(heightweight, aes(x=ageYear, y=heightIn)) + geom_point()
unnamed-chunk-11
# shape參數設置點型 size設置點的大小
ggplot(heightweight, aes(x=ageYear, y=heightIn)) + 
  geom_point(shape=21)
ggplot(heightweight, aes(x=ageYear, y=heightIn)) + 
  geom_point(size=1.5)
image-20210816225649979

3.2 使用點形和顏色屬性進行分組

head(heightweight[, c("sex", "ageYear", "heightIn")])
> head(heightweight[, c("sex", "ageYear", "heightIn")])
  sex ageYear heightIn
1   f   11.92     56.3
2   f   12.92     62.3
3   f   12.75     63.3
4   f   13.42     59.0
5   f   15.92     62.5
6   f   14.25     62.5
ggplot(heightweight, aes(x=ageYear, y=heightIn, colour=sex)) + 
  geom_point()
ggplot(heightweight, aes(x=ageYear, y=heightIn, shape=sex)) + 
  geom_point()
unnamed-chunk-14
unnamed-chunk-15
# scale_shape_manual()使用其它點形狀
#scale_colour_brewer()使用其它顏色
ggplot(heightweight, aes(x=ageYear, y=heightIn, shape=sex, colour=sex)) +
  geom_point() +
  scale_shape_manual(values=c(1,2)) +
  scale_colour_brewer(palette="Set1")
unnamed-chunk-17

3.3 使用不同于默認設置的點形

# 使用點形和填充色屬性分別表示不同變量
hw <- heightweight
# 分組 Categorize into <100 and >=100 groups
hw$weightGroup <- cut(hw$weightLb, breaks=c(-Inf, 100, Inf),
                      labels=c("< 100", ">= 100"))

# 使用具有顏色和填充色的點形及對應于空值(NA)和填充色的顏色
ggplot(hw, aes(x=ageYear, y=heightIn, shape=sex, fill=weightGroup)) +
  geom_point(size=2.5) +
  scale_shape_manual(values=c(21, 24)) +
  scale_fill_manual(values=c(NA, "black"),
                    guide=guide_legend(override.aes=list(shape=21)))

unnamed-chunk-33

3.4 將連續型變量映射到點的顏色或大小屬性上

ggplot(heightweight, aes(x=ageYear, y=heightIn, colour=weightLb)) + 
  geom_point()

ggplot(heightweight, aes(x=ageYear, y=heightIn, size=weightLb)) + 
  geom_point()
image-20210817114855294
# 默認點的大小范圍為1-6mm
# scale_size_continuous(range=c(2, 5))修改點的大小范圍
# 將色階設定為由黑至白
ggplot(heightweight, aes(x=weightLb, y=heightIn, fill=ageYear)) +
  geom_point(shape=21, size=2.5) +
  scale_fill_gradient(low="black", high="white")

# 使用 guide_legend() 函數以離散的圖例代替色階
ggplot(heightweight, aes(x=weightLb, y=heightIn, fill=ageYear)) +
  geom_point(shape=21, size=2.5) +
  scale_fill_gradient(low="black", high="white", breaks=12:17,
                      guide=guide_legend())
image-20210817165620820
# 調用scale_size_area()函數使數據點的面積正比于變量值。
ggplot(heightweight, aes(x=ageYear, y=heightIn, size=weightLb, colour=sex)) +
  geom_point(alpha=.5) +
  scale_size_area() +   
  scale_colour_brewer(palette="Set1")
unnamed-chunk-45

3.5 處理圖形重疊

方法:

  • 使用半透明的點
  • 將數據分箱(bin),并用矩形表示
  • 將數據分箱(bin),并用六邊形表示
  • 使用箱線圖
sp <- ggplot(diamonds, aes(x=carat, y=price))
sp + geom_point()
# 透明度
sp + geom_point(alpha=.1)
sp + geom_point(alpha=.01)

# stat_bin2d()函數默認分別在x軸和y軸方向上將數據分割為30各組
sp + stat_bin2d()

# bin=50設置箱數,limits參數設定圖例范圍
sp + stat_bin2d(bins=50) +
  scale_fill_gradient(low="lightblue", high="red", limits=c(0, 6000))
image-20210817173245460
# stat_binhex()函數使用六邊形分箱
library(hexbin)
sp + stat_binhex() +
  scale_fill_gradient(low="lightblue", high="red",
                      limits=c(0, 8000))

sp + stat_binhex() +
  scale_fill_gradient(low="lightblue", high="red",
                      breaks=c(0, 250, 500, 1000, 2000, 4000, 6000),
                      limits=c(0, 6000))
image-20210817174431437
sp1 <- ggplot(ChickWeight, aes(x=Time, y=weight))

sp1 + geom_point()
# 調用position_jitter()函數給數據點增加隨機擾動,通過width,height參數調節
sp1 + geom_point(position="jitter")
# 也可以調用 geom_jitter()
sp1 + geom_point(position=position_jitter(width=.5, height=0))
image-20210817175225507
# 箱線圖
sp1 + geom_boxplot(aes(group=Time))
unnamed-chunk-511

參考書籍

  • R Graphics Cookbook, 2nd edition.
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